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Analysis of the real EADGENE data set : Comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (Open Access publication)

Identifieur interne : 001577 ( Main/Exploration ); précédent : 001576; suivant : 001578

Analysis of the real EADGENE data set : Comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (Open Access publication)

Auteurs : Florence Jaffrezic [France] ; Dirk-Jan De Koning [Royaume-Uni] ; Paul J. Boettcher [Italie] ; Agnes Bonnet [France] ; Bart Buitenhuis [Danemark] ; Rodrigue Closset [Belgique] ; Sébastien Dejean [France] ; Céline Delmas [France] ; Johanne C. Detilleux [Belgique] ; Peter Dovc [Slovénie] ; Mylène Duval [France] ; Jean-Louis Foulley [France] ; Jakob Hedegaard [Danemark] ; Henrik Hornsh J [Danemark] ; Ina Hulsegge [Pays-Bas] ; Luc Janss [Danemark] ; Kirsty Jensen [Royaume-Uni] ; Li Jiang [Danemark] ; Miha Lavric [Slovénie] ; Kim-Anh Le Cao [France] ; Mogens Sand Lund [Danemark] ; Roberto Malinverni [Italie] ; Guillemette Marot [France] ; Haisheng Nie [Pays-Bas] ; Wolfram Petzl [Allemagne] ; Marco H. Pool [Pays-Bas] ; Christèle Robert-Granie [France] ; Magali San Cristobal [France] ; Evert M. Van Schothorst [Pays-Bas] ; Hans-Joachim Schuberth [Allemagne] ; Peter S Rensen [Danemark] ; Alessandra Stella [Italie] ; Gwenola Tosser-Klopp [France] ; David Waddington [Royaume-Uni] ; Michael Watson [Royaume-Uni] ; Wei Yang [Allemagne] ; Holm Zerbe [Allemagne] ; Hans-Martin Seyfert [Allemagne]

Source :

RBID : Pascal:08-0064034

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Le document en format XML

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<author>
<name sortKey="S Rensen, Peter" sort="S Rensen, Peter" uniqKey="S Rensen P" first="Peter" last="S Rensen">Peter S Rensen</name>
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<inist:fA14 i1="05">
<s1>University of Aarhus</s1>
<s2>Tjele</s2>
<s3>DNK</s3>
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<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
<sZ>16 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>31 aut.</sZ>
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<country>Danemark</country>
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<name sortKey="Stella, Alessandra" sort="Stella, Alessandra" uniqKey="Stella A" first="Alessandra" last="Stella">Alessandra Stella</name>
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<inist:fA14 i1="03">
<s1>Parco Tecnologico Padano</s1>
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<s3>ITA</s3>
<sZ>3 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>32 aut.</sZ>
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<country>Italie</country>
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<author>
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<inist:fA14 i1="04">
<s1>INRA, UMR444</s1>
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<sZ>4 aut.</sZ>
<sZ>28 aut.</sZ>
<sZ>33 aut.</sZ>
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<country>France</country>
<wicri:noRegion>Castanet-Tolosan</wicri:noRegion>
<wicri:noRegion>UMR444</wicri:noRegion>
<wicri:noRegion>Castanet-Tolosan</wicri:noRegion>
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<author>
<name sortKey="Waddington, David" sort="Waddington, David" uniqKey="Waddington D" first="David" last="Waddington">David Waddington</name>
<affiliation wicri:level="1">
<inist:fA14 i1="02">
<s1>Roslin Institute</s1>
<s2>Roslin</s2>
<s3>GBR</s3>
<sZ>2 aut.</sZ>
<sZ>17 aut.</sZ>
<sZ>34 aut.</sZ>
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<country>Royaume-Uni</country>
<wicri:noRegion>Roslin Institute</wicri:noRegion>
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<author>
<name sortKey="Watson, Michael" sort="Watson, Michael" uniqKey="Watson M" first="Michael" last="Watson">Michael Watson</name>
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<inist:fA14 i1="16">
<s1>Institute for Animal Health</s1>
<s2>Compton</s2>
<s3>GBR</s3>
<sZ>35 aut.</sZ>
</inist:fA14>
<country>Royaume-Uni</country>
<wicri:noRegion>Institute for Animal Health</wicri:noRegion>
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</author>
<author>
<name sortKey="Yang, Wei" sort="Yang, Wei" uniqKey="Yang W" first="Wei" last="Yang">Wei Yang</name>
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<inist:fA14 i1="17">
<s1>Research Institute for the Biology of Farm Animals</s1>
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<s3>DEU</s3>
<sZ>36 aut.</sZ>
<sZ>38 aut.</sZ>
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<country>Allemagne</country>
<wicri:noRegion>Dummerstorf</wicri:noRegion>
<wicri:noRegion>Research Institute for the Biology of Farm Animals</wicri:noRegion>
<wicri:noRegion>Research Institute for the Biology of Farm Animals</wicri:noRegion>
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</author>
<author>
<name sortKey="Zerbe, Holm" sort="Zerbe, Holm" uniqKey="Zerbe H" first="Holm" last="Zerbe">Holm Zerbe</name>
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<inist:fA14 i1="13">
<s1>Ludwig -Maximilians -University</s1>
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<s3>DEU</s3>
<sZ>25 aut.</sZ>
<sZ>37 aut.</sZ>
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<country>Allemagne</country>
<placeName>
<region type="land" nuts="1">Bavière</region>
<region type="district" nuts="2">District de Haute-Bavière</region>
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<author>
<name sortKey="Seyfert, Hans Martin" sort="Seyfert, Hans Martin" uniqKey="Seyfert H" first="Hans-Martin" last="Seyfert">Hans-Martin Seyfert</name>
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<inist:fA14 i1="17">
<s1>Research Institute for the Biology of Farm Animals</s1>
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<s3>DEU</s3>
<sZ>36 aut.</sZ>
<sZ>38 aut.</sZ>
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<country>Allemagne</country>
<wicri:noRegion>Dummerstorf</wicri:noRegion>
<wicri:noRegion>Research Institute for the Biology of Farm Animals</wicri:noRegion>
<wicri:noRegion>Research Institute for the Biology of Farm Animals</wicri:noRegion>
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<title xml:lang="en" level="a">Analysis of the real EADGENE data set : Comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (Open Access publication)</title>
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<name sortKey="Jaffrezic, Florence" sort="Jaffrezic, Florence" uniqKey="Jaffrezic F" first="Florence" last="Jaffrezic">Florence Jaffrezic</name>
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<inist:fA14 i1="01">
<s1>INRA, UR337</s1>
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<sZ>1 aut.</sZ>
<sZ>12 aut.</sZ>
<sZ>23 aut.</sZ>
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<country>France</country>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
<wicri:noRegion>UR337</wicri:noRegion>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
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<author>
<name sortKey="De Koning, Dirk Jan" sort="De Koning, Dirk Jan" uniqKey="De Koning D" first="Dirk-Jan" last="De Koning">Dirk-Jan De Koning</name>
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<inist:fA14 i1="02">
<s1>Roslin Institute</s1>
<s2>Roslin</s2>
<s3>GBR</s3>
<sZ>2 aut.</sZ>
<sZ>17 aut.</sZ>
<sZ>34 aut.</sZ>
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<country>Royaume-Uni</country>
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<author>
<name sortKey="Boettcher, Paul J" sort="Boettcher, Paul J" uniqKey="Boettcher P" first="Paul J." last="Boettcher">Paul J. Boettcher</name>
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<inist:fA14 i1="03">
<s1>Parco Tecnologico Padano</s1>
<s2>Lodi</s2>
<s3>ITA</s3>
<sZ>3 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>32 aut.</sZ>
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<country>Italie</country>
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<author>
<name sortKey="Bonnet, Agnes" sort="Bonnet, Agnes" uniqKey="Bonnet A" first="Agnes" last="Bonnet">Agnes Bonnet</name>
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<inist:fA14 i1="04">
<s1>INRA, UMR444</s1>
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<s3>FRA</s3>
<sZ>4 aut.</sZ>
<sZ>28 aut.</sZ>
<sZ>33 aut.</sZ>
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<country>France</country>
<wicri:noRegion>Castanet-Tolosan</wicri:noRegion>
<wicri:noRegion>UMR444</wicri:noRegion>
<wicri:noRegion>Castanet-Tolosan</wicri:noRegion>
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<author>
<name sortKey="Buitenhuis, Bart" sort="Buitenhuis, Bart" uniqKey="Buitenhuis B" first="Bart" last="Buitenhuis">Bart Buitenhuis</name>
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<inist:fA14 i1="05">
<s1>University of Aarhus</s1>
<s2>Tjele</s2>
<s3>DNK</s3>
<sZ>5 aut.</sZ>
<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
<sZ>16 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>31 aut.</sZ>
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<country>Danemark</country>
<wicri:noRegion>University of Aarhus</wicri:noRegion>
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<author>
<name sortKey="Closset, Rodrigue" sort="Closset, Rodrigue" uniqKey="Closset R" first="Rodrigue" last="Closset">Rodrigue Closset</name>
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<inist:fA14 i1="06">
<s1>University of Liège</s1>
<s2>Liège</s2>
<s3>BEL</s3>
<sZ>6 aut.</sZ>
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<country>Belgique</country>
<wicri:noRegion>University of Liège</wicri:noRegion>
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<author>
<name sortKey="Dejean, Sebastien" sort="Dejean, Sebastien" uniqKey="Dejean S" first="Sébastien" last="Dejean">Sébastien Dejean</name>
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<inist:fA14 i1="07">
<s1>Université Paul Sabatier</s1>
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<sZ>7 aut.</sZ>
<sZ>20 aut.</sZ>
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<country>France</country>
<placeName>
<settlement type="city">Toulouse</settlement>
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<orgName type="university">Université Toulouse III - Paul Sabatier</orgName>
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<settlement type="city">Toulouse</settlement>
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<name sortKey="Delmas, Celine" sort="Delmas, Celine" uniqKey="Delmas C" first="Céline" last="Delmas">Céline Delmas</name>
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<inist:fA14 i1="08">
<s1>INRA, UR631</s1>
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<s3>FRA</s3>
<sZ>8 aut.</sZ>
<sZ>11 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>27 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>Castanel-Tolosan</wicri:noRegion>
<wicri:noRegion>UR631</wicri:noRegion>
<wicri:noRegion>Castanel-Tolosan</wicri:noRegion>
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<author>
<name sortKey="Detilleux, Johanne C" sort="Detilleux, Johanne C" uniqKey="Detilleux J" first="Johanne C." last="Detilleux">Johanne C. Detilleux</name>
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<s1>Faculty of Veterinary Medicine, University of Liège</s1>
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<s3>BEL</s3>
<sZ>9 aut.</sZ>
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<country>Belgique</country>
<wicri:noRegion>Liège</wicri:noRegion>
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<author>
<name sortKey="Dovc, Peter" sort="Dovc, Peter" uniqKey="Dovc P" first="Peter" last="Dovc">Peter Dovc</name>
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<inist:fA14 i1="10">
<s1>University of Ljubljana</s1>
<s3>SVN</s3>
<sZ>10 aut.</sZ>
<sZ>19 aut.</sZ>
</inist:fA14>
<country>Slovénie</country>
<wicri:noRegion>University of Ljubljana</wicri:noRegion>
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<author>
<name sortKey="Duval, Mylene" sort="Duval, Mylene" uniqKey="Duval M" first="Mylène" last="Duval">Mylène Duval</name>
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<inist:fA14 i1="08">
<s1>INRA, UR631</s1>
<s2>Castanel-Tolosan</s2>
<s3>FRA</s3>
<sZ>8 aut.</sZ>
<sZ>11 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>27 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>Castanel-Tolosan</wicri:noRegion>
<wicri:noRegion>UR631</wicri:noRegion>
<wicri:noRegion>Castanel-Tolosan</wicri:noRegion>
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<author>
<name sortKey="Foulley, Jean Louis" sort="Foulley, Jean Louis" uniqKey="Foulley J" first="Jean-Louis" last="Foulley">Jean-Louis Foulley</name>
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<inist:fA14 i1="01">
<s1>INRA, UR337</s1>
<s2>Jouy-en-Josas</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
<sZ>12 aut.</sZ>
<sZ>23 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
<wicri:noRegion>UR337</wicri:noRegion>
<wicri:noRegion>Jouy-en-Josas</wicri:noRegion>
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<author>
<name sortKey="Hedegaard, Jakob" sort="Hedegaard, Jakob" uniqKey="Hedegaard J" first="Jakob" last="Hedegaard">Jakob Hedegaard</name>
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<inist:fA14 i1="05">
<s1>University of Aarhus</s1>
<s2>Tjele</s2>
<s3>DNK</s3>
<sZ>5 aut.</sZ>
<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
<sZ>16 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>31 aut.</sZ>
</inist:fA14>
<country>Danemark</country>
<wicri:noRegion>University of Aarhus</wicri:noRegion>
</affiliation>
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<author>
<name sortKey="Hornsh J, Henrik" sort="Hornsh J, Henrik" uniqKey="Hornsh J H" first="Henrik" last="Hornsh J">Henrik Hornsh J</name>
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<inist:fA14 i1="05">
<s1>University of Aarhus</s1>
<s2>Tjele</s2>
<s3>DNK</s3>
<sZ>5 aut.</sZ>
<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
<sZ>16 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>31 aut.</sZ>
</inist:fA14>
<country>Danemark</country>
<wicri:noRegion>University of Aarhus</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Hulsegge, Ina" sort="Hulsegge, Ina" uniqKey="Hulsegge I" first="Ina" last="Hulsegge">Ina Hulsegge</name>
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<inist:fA14 i1="11">
<s1>Animal Sciences Group Wageningen UR</s1>
<s2>Lelystad</s2>
<s3>NLD</s3>
<sZ>15 aut.</sZ>
<sZ>26 aut.</sZ>
</inist:fA14>
<country>Pays-Bas</country>
<wicri:noRegion>Animal Sciences Group Wageningen UR</wicri:noRegion>
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</author>
<author>
<name sortKey="Janss, Luc" sort="Janss, Luc" uniqKey="Janss L" first="Luc" last="Janss">Luc Janss</name>
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<inist:fA14 i1="05">
<s1>University of Aarhus</s1>
<s2>Tjele</s2>
<s3>DNK</s3>
<sZ>5 aut.</sZ>
<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
<sZ>16 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>31 aut.</sZ>
</inist:fA14>
<country>Danemark</country>
<wicri:noRegion>University of Aarhus</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Jensen, Kirsty" sort="Jensen, Kirsty" uniqKey="Jensen K" first="Kirsty" last="Jensen">Kirsty Jensen</name>
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<inist:fA14 i1="02">
<s1>Roslin Institute</s1>
<s2>Roslin</s2>
<s3>GBR</s3>
<sZ>2 aut.</sZ>
<sZ>17 aut.</sZ>
<sZ>34 aut.</sZ>
</inist:fA14>
<country>Royaume-Uni</country>
<wicri:noRegion>Roslin Institute</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Jiang, Li" sort="Jiang, Li" uniqKey="Jiang L" first="Li" last="Jiang">Li Jiang</name>
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<inist:fA14 i1="05">
<s1>University of Aarhus</s1>
<s2>Tjele</s2>
<s3>DNK</s3>
<sZ>5 aut.</sZ>
<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
<sZ>16 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>31 aut.</sZ>
</inist:fA14>
<country>Danemark</country>
<wicri:noRegion>University of Aarhus</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lavric, Miha" sort="Lavric, Miha" uniqKey="Lavric M" first="Miha" last="Lavric">Miha Lavric</name>
<affiliation wicri:level="1">
<inist:fA14 i1="10">
<s1>University of Ljubljana</s1>
<s3>SVN</s3>
<sZ>10 aut.</sZ>
<sZ>19 aut.</sZ>
</inist:fA14>
<country>Slovénie</country>
<wicri:noRegion>University of Ljubljana</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Le Cao, Kim Anh" sort="Le Cao, Kim Anh" uniqKey="Le Cao K" first="Kim-Anh" last="Le Cao">Kim-Anh Le Cao</name>
<affiliation wicri:level="4">
<inist:fA14 i1="07">
<s1>Université Paul Sabatier</s1>
<s2>Toulouse</s2>
<s3>FRA</s3>
<sZ>7 aut.</sZ>
<sZ>20 aut.</sZ>
</inist:fA14>
<country>France</country>
<placeName>
<settlement type="city">Toulouse</settlement>
</placeName>
<orgName type="university">Université Toulouse III - Paul Sabatier</orgName>
<placeName>
<settlement type="city">Toulouse</settlement>
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<region type="old region" nuts="2">Midi-Pyrénées</region>
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</affiliation>
<affiliation wicri:level="1">
<inist:fA14 i1="08">
<s1>INRA, UR631</s1>
<s2>Castanel-Tolosan</s2>
<s3>FRA</s3>
<sZ>8 aut.</sZ>
<sZ>11 aut.</sZ>
<sZ>20 aut.</sZ>
<sZ>27 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>Castanel-Tolosan</wicri:noRegion>
<wicri:noRegion>UR631</wicri:noRegion>
<wicri:noRegion>Castanel-Tolosan</wicri:noRegion>
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</author>
<author>
<name sortKey="Lund, Mogens Sand" sort="Lund, Mogens Sand" uniqKey="Lund M" first="Mogens Sand" last="Lund">Mogens Sand Lund</name>
<affiliation wicri:level="1">
<inist:fA14 i1="05">
<s1>University of Aarhus</s1>
<s2>Tjele</s2>
<s3>DNK</s3>
<sZ>5 aut.</sZ>
<sZ>13 aut.</sZ>
<sZ>14 aut.</sZ>
<sZ>16 aut.</sZ>
<sZ>18 aut.</sZ>
<sZ>21 aut.</sZ>
<sZ>31 aut.</sZ>
</inist:fA14>
<country>Danemark</country>
<wicri:noRegion>University of Aarhus</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Malinverni, Roberto" sort="Malinverni, Roberto" uniqKey="Malinverni R" first="Roberto" last="Malinverni">Roberto Malinverni</name>
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<inist:fA14 i1="03">
<s1>Parco Tecnologico Padano</s1>
<s2>Lodi</s2>
<s3>ITA</s3>
<sZ>3 aut.</sZ>
<sZ>22 aut.</sZ>
<sZ>32 aut.</sZ>
</inist:fA14>
<country>Italie</country>
<wicri:noRegion>Parco Tecnologico Padano</wicri:noRegion>
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<title level="j" type="main">Genetics selection evolution : (Print)</title>
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